Difference between revisions of "User:Sbonnin"

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{{Bio
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#REDIRECT [[AltUser:Sarah_Bonnin]]
|Name=Sarah
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|Surnames=Bonnin
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|Photo=SBonnin.jpg
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|Position=Bioinformatician
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|Email_address=sarah.bonnin@crg.eu
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|ORCID=0000-0001-5159-2518
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|LinkedIn=sarahbonnin
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|Description=<br /><br />
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<b>Professional experience:</b>
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* Since October 2014: Bioinformatician at CRG Bioinformatics Unit, Barcelona, Spain.
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* January 2012 - October 2014: Bioinformatician at CRG Genomics Unit, Barcelona, Spain.
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* February 2009 - January 2012: Bioinformatician at CRG Microarray Unit, Barcelona, Spain.
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* January 2008 - January 2009: Bioinformatician at Institut Curie, Paris, France.
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<b>Current fields of analysis/development:</b>
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* Transcriptomics: RNA-seq, RIP-seq, iCLIP, Microarray gene expression, High Throughput qPCR
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* Genomics: ChIP-seq, ATAC-seq, Ribosome profiling
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* R Shiny applications development
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<br>
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<b>Training given</b> (all held at the CRG in Barcelona):
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* March-April 2018: Introduction to R. Internal CRG training.
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* October 2017: Introduction to statistics and R. CRG Master course.
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* July 2017: Introduction to R. Internal CRG training.
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* May 2016: Introduction to R and graphing in ggplot2. BIST Introduction to Biostatistics Course.
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* October 2015: Gene expression and Functional analysis. CRG Master course.
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* October 2012: Quality control of exome data & SNP and InDel calling in exome data. Second Generation Sequencing – Lab methods and Data Analysis.
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* February 2011: Introduction to R and Bioconductor. Bioinformatics workshop for PostDocs.
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<br>
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<b> Trainings attended </b>
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* 2018:
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** NGSchool2018: Nanopore sequencing & personalised medicine (40h) - Lublin, Poland.
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** Network & Pathways (24h) - EMBL-EBI, Hinxton, UK.
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* 2017:
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** Interactive data analysis and visualization with R Shiny (35h), Transmitting science, Spain.
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** Train the Trainer (8h) - PRBB Intervals program.
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* 2016:
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** Train the trainer; University of Ljubljana, Slovenia - ELIXIR-Slovenia.
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** Sharpen your reasoning skills, PRBB Intervals program.
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** Elevator pitch, PRBB Intervals program.
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** Effective team playing to achieve your goals, PRBB Intervals program.
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* 2011:
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** Statistical methods for post-genomic data.
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** R programming and development, EMBL, Heidelberg, Germany.
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* 2010:
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** Microarray and HTS data analysis with Bioconductor, EMBL-EBI, Hinxton, UK.
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* 2009:
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** V International course of microarray data analysis, CIPF, Valencia, Spain
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<br>
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<b>University degrees:</b>
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* September 2007: Masters degree in Bioinformatics from University Denis Diderot, Paris, France.
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* June 2005: Bachelor's degree in Biology from University Claude Bernard, Lyon, France.
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}}
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Latest revision as of 08:10, 1 December 2021

Bioinformatics Core Facility @ CRG — 2011-2024