Software
From Bioinformatics Core Wiki
- Software:20200122145903 (Has Title VectorQC, Has Description NextFlow pipeline for assembly and annotation of DNA vectors, Has URL https://github.com/biocorecrg/vectorQC)
- Software:20200122145847 (Has Title Transcriptome assembly, Has Description Nextflow pipeline for de novo transcriptome assembly and annotation based on Trinity and Transdecoder, Has URL https://github.com/biocorecrg/transcriptome_assembly)
- Software:20200226125459 (Has Title TEQC, Has Description R package for Quality control of target capture experiments, Has URL https://www.bioconductor.org/packages/devel/bioc/html/TEQC.html)
- Software:20200609105549 (Has Title Mothur procedures, Has Description Shell scripts for processing ITS (fungi) and 16S rRNA (bacteria) amplicon sequencing data (MiSeq) in mothur., Has URL https://github.com/biocorecrg/microbiome_procedures)
- Software:20200122145355 (Has Title Master of Pores, Has Description Nextflow pipeline for analysis of direct RNA Nanopore reads, Has URL https://github.com/biocorecrg/master_of_pores)
- Software:20200122145600 (Has Title Indrop-Flow, Has Description Indrops analysis pipeline based on DropEST, Has URL https://github.com/biocorecrg/indrop)
- Software:20200226125422 (Has Title HiC-inspector, Has Description High-throughput conformation capture (Hi-C) allows to study the three-dimensional architecture of whole genomes through the detection of long range chromosomal interactions, Has URL https://github.com/HiC-inspector/HiC-inspector)
- Software:20200122150034 (Has Title FA-nf (functional annotation), Has Description NextFlow pipeline for functional annotation of proteins from non-model organisms based on InterPro and Blast, Has URL https://github.com/guigolab/FA-nf)
