Difference between revisions of "Template:ListUserTasks"
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Revision as of 10:05, 4 September 2015
[[{{{1}}}]]
| Task Name | Start Date | End Date | Description | Hours | Task Status | Request | Request Status
|
|---|---|---|---|---|---|---|---|
| Biocore wiki support, dev and maintenance | 26 November 2009 | 4 June 2012 | Finished | Generic Wiki development & support | Closed
| ||
| Proteowiki | 1 March 2010 | 1 May 2012 | Time in Proteowiki
|
Finished | Generic Wiki development & support | Closed
| |
| Scientific software support | 1 June 2010 | Support to users in the scientific software installation
|
Finished | Scientific software support/evaluation | Closed
| ||
| Software evaluation | 1 June 2010 | Evaluation of the different licensed software alternatives currently present at the CRG
|
Finished | Scientific software support/evaluation | Closed
| ||
| User support for Protein Service Wiki | 1 January 2011 | 4 June 2012 | User support for Protein Service team using the wiki
|
Finished | Generic Wiki development & support | Closed
| |
| User support for project-specific wikis | 1 May 2011 | 4 June 2012 | Finished | Generic Wiki development & support | Closed
| ||
| Development of project-specific wikis | 1 May 2011 | 4 June 2012 | Finished | Generic Wiki development & support | Closed
| ||
| Ensembl Genome/Proteome/Transcriptome: Scripts implementation | 1 July 2011 | 31 July 2011 | Implementation of the scripts to the Ensembl mirror of Genome/Proteome/Transcriptome
|
Finished | Database mirroring | Closed
| |
| Filtering reads | 1 July 2011 | 31 July 2011 | Filtering reads by quality. This is necessary to improve the quality of the De novo transcriptome assembly
|
Finished | Lynx transcriptome assemby | Closed
| |
| Great work | 10 July 2011 | 11 July 2011 | Ieaaa!
|
Finished | One example of Request | Discarded
| |
| Another try | 12 July 2011 | 13 July 2011 | Done a lot
|
Finished | One example of Request | Discarded
| |
| MET0027 | 26 July 2011 | 26 July 2011 | MET0027 project
QC analysis for Illumina Infinium Methylation array 27k.
|
Finished | MET0027 | Closed
| |
| Standard chipseq | 27 July 2011 | 10 August 2011 | 2 sample vs 1 control
|
Finished | Lange's chipseq (phf19) | Closed
| |
| Standard chipseq | 27 July 2011 | 5 August 2011 | Standard chipseq of 2 samples vs 1 control (Ig)
|
Finished | Sarah Kinkley's chipseq (spok1) | Closed
| |
| sitepro and custom sitepro | 30 July 2011 | 5 August 2011 | We used sitepro on peaks and we developed another strategy to implement a similar analysis but normalizing the signal. We compared against random TSS and random portion of the genome.
|
Finished | Lange's chipseq (phf19) | Closed
| |
| De novo transcriptome assembly (tissue-based) | 31 July 2011 | 1 November 2011 | De novo transcriptome assembly using Trinity for each tissue independently
|
Finished | Lynx transcriptome assemby | Closed
| |
| chipseq 2 | 1 August 2011 | Chipseq on EB9_RING1B, EB9_cbx4, EB9_cbx2 using EB9_IgG (EB9 cell lines). Genome of reference is mouse. We received sequences once per week...
|
Finished | Lluis Morey's chipseq (jul-2011) | Closed
| ||
| Chipseq 1 | 1 August 2011 | 8 September 2011 | Custom chipseq analysis following a Cell stem cell paper (Karimi MM et al. 2011)
|
Finished | Cosma Chipseq | Closed
| |
| chipseq 1 | 1 August 2011 | 8 August 2011 | Chipseq using Cosma IgG as control. Sample analyzed were Cbx6, RING_1B_KO_Cbx7 and EED_KO_Cbx7. We provided a special annotation extending the peaks to 5 kb.
|
Finished | Lluis Morey's chipseq (jul-2011) | Closed
| |
| Gene annotation of peaks | 10 August 2011 | 10 August 2011 | Finished | Sarah Kinkley's chipseq (spok1) | Closed
| ||
| Chipseq 1 | 1 September 2011 | 17 October 2011 | Standard chipseq on 2 samples vs 2 KO
|
Finished | Lopez chipseq | Closed
| |
| NCBI mirrors: Scripts implementation | 1 September 2011 | 30 September 2011 | Mirror of files at ftp://ftp.ncbi.nlm.nih.gov/blast/db/FASTA/. Format for Blast. Implementation of the scripts
|
Finished | Database mirroring | Closed
| |
| venn diagram | 5 September 2011 | 5 September 2011 | Venn diagram for 3 list of genes
|
Finished | Lluis Morey's chipseq (jul-2011) | Closed
| |
| chipseq | 6 September 2011 | 7 September 2011 | - Zrf1-FLAG_24 vs Ctrl-FLAG_24
- Zrf1-FLAG_0 vs Ctrl-FLAG_0 - gene annotation x2 - gene ontology x2 |
Finished | Aloia's chipseq (ZRF1) | Closed
| |
| The whole analysis | 10 September 2011 | 29 September 2011 | Finished | Mympn gene re-annotation | Closed
|
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