Difference between revisions of "Standard Bioinformatics Services Cost"
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| − | The prices provided below are for guidance only. They are estimated | + | The prices provided below are for guidance only. |
| + | They are estimated considering human/mouse data and '''[https://www.crg.eu/sites/default/files/crg/bioinformatics_fees_2023r0.pdf the CRG officially established cost of the manual work and computing hours]''', effective as of January 1, 2018. VAT is not included. (+ denotes the minimum price) | ||
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| − | * '''mRNA-seq''': Data pre-processing (strand control, ribosome contamination and quality filtering, adapter trimming, read pairing, QC), read mapping to a reference genome, differential expression analysis at gene | + | * '''mRNA-seq''': Data pre-processing (strand control, ribosome contamination and quality filtering, adapter trimming, |
| − | **'''€ {{#expr: ( | + | read pairing, QC), read mapping to a reference genome, differential expression analysis at gene level, |
| − | **'''€ {{#expr: ( | + | profiles for Genome Browser '''''(price per small project of up to 12 samples)''''' |
| + | **'''€ {{#expr: (26.10*12 + 1.3*25) round 0}}+''' (CRG / PRBB) | ||
| + | **'''€ {{#expr: (44.75*12 + 2.23*25) round 0}}+''' (NON-PROFIT / GOVERNMENT) | ||
<br/> | <br/> | ||
| − | * ''' | + | * '''small RNA-seq (microRNA, tRNA)''': Data pre-processing (quality filtering, adapter trimming, size distribution, QC), read mapping to a reference genome, differential expression analysis |
| − | **'''€ {{#expr: ( | + | '''''(price per small project of up to 12 samples)''''' |
| − | **'''€ {{#expr: ( | + | **'''€ {{#expr: (26.10*12 + 1.3*10) round 0}}+''' (CRG / PRBB) |
| + | **'''€ {{#expr: (44.75*12 + 2.23*10) round 0}}+''' (NON-PROFIT / GOVERNMENT) | ||
<br/> | <br/> | ||
| − | * '''ChIP-seq''': Data pre-processing, read mapping, peak calling, profiles for Genome Browser '''''(price per | + | * '''ChIP-seq / ATAC-seq''': Data pre-processing, read mapping, peak calling, profiles for Genome Browser, differential enrichment analysis |
| − | **'''€ {{#expr: ( | + | '''''(price per small project of up to 12 samples)''''' |
| − | **'''€ {{#expr: ( | + | **'''€ {{#expr: (26.10*12 + 1.3*16) round 0}}+''' (CRG / PRBB) |
| + | **'''€ {{#expr: (44.75*12 + 2.23*16) round 0}}+''' (NON-PROFIT / GOVERNMENT) | ||
<br/> | <br/> | ||
| − | * ''' | + | * '''16S rRNA / ITS sequencing''': Data pre-processing (read quality control, filtering, trimming, assembling), |
| − | **''' € {{#expr: ( | + | OTU assignment, taxa abundances profiles '''''(price per small project of up to 96 samples, or one plate)''''' |
| − | **''' € {{#expr: ( | + | **''' € {{#expr: (26.10*0.10*96 + 1.3*96 + 26.10*5) round 0}}+''' (CRG / PRBB) |
| + | **''' € {{#expr: (44.75*0.10*96 + 2.23*96 + 44.75*5) round 0}}+''' (NON-PROFIT / GOVERNMENT) | ||
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Revision as of 11:54, 14 February 2023
The prices provided below are for guidance only.
They are estimated considering human/mouse data and the CRG officially established cost of the manual work and computing hours, effective as of January 1, 2018. VAT is not included. (+ denotes the minimum price)
- mRNA-seq: Data pre-processing (strand control, ribosome contamination and quality filtering, adapter trimming,
read pairing, QC), read mapping to a reference genome, differential expression analysis at gene level, profiles for Genome Browser (price per small project of up to 12 samples)
- € 346+ (CRG / PRBB)
- € 593+ (NON-PROFIT / GOVERNMENT)
- small RNA-seq (microRNA, tRNA): Data pre-processing (quality filtering, adapter trimming, size distribution, QC), read mapping to a reference genome, differential expression analysis
(price per small project of up to 12 samples)
- € 326+ (CRG / PRBB)
- € 559+ (NON-PROFIT / GOVERNMENT)
- ChIP-seq / ATAC-seq: Data pre-processing, read mapping, peak calling, profiles for Genome Browser, differential enrichment analysis
(price per small project of up to 12 samples)
- € 334+ (CRG / PRBB)
- € 573+ (NON-PROFIT / GOVERNMENT)
- 16S rRNA / ITS sequencing: Data pre-processing (read quality control, filtering, trimming, assembling),
OTU assignment, taxa abundances profiles (price per small project of up to 96 samples, or one plate)
- € 506+ (CRG / PRBB)
- € 867+ (NON-PROFIT / GOVERNMENT)
