Difference between revisions of "User:Lcozzuto"

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|HomePage=http://www.linkedin.com/in/cozzuto
 
|HomePage=http://www.linkedin.com/in/cozzuto
 
|ORCID=0000-0003-3194-8892
 
|ORCID=0000-0003-3194-8892
|LinkedIn=http://www.linkedin.com/in/cozzuto
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|LinkedIn=www.linkedin.com/in/cozzuto
|Description=Luca Cozzuto got a four year PhD in Molecular Medicine at European School of Molecular Medicine in 2009 ([http://www.semm.it]) after a five years degree in Pharmaceutical Biotechnologies at University of Naples "Federico II" in 2004.  
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|Description=<br /><br /><br />
During his degree thesis he studied the structure of chemically modified DNA quadruplex by using NMR together with molecular dynamics. During the PhD he was involved in detection and characterization of bacterial RNA repeats showing a common secondary structure. Here he learnt programming, database and website developing and a number of bioinformatics tools for detecting non coding RNAs, sequence clustering and sequence comparison. He was also involved in the assembling and annotations of two bacterial genomes, in the analysis of chip-seq data and in giving bioinformatic support to biological research.
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Dr. Luca Cozzuto obtained the PhD in Molecular Medicine at the European School of Molecular Medicine in 2009 ([http://www.semm.it]) after getting the Master degree in Pharmaceutical Biotechnologies at the University of Naples "Federico II" in 2004.  
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During his PhD he studied the structure of chemically modified DNA quadruplex by using NMR along with molecular dynamics approaches. He was also involved in detection and characterization of bacterial RNA repeats with a common secondary structure. Here he learnt programming, database and website developing and a number of bioinformatics tools for detecting non-coding RNAs, sequence clustering and sequence comparison. He was also involved in assembling and annotations of two bacterial genomes, analysis of ChIP-seq data and bioinformatic support to biological research.
  
 
=== My work at the Bioinformatics Unit: ===
 
=== My work at the Bioinformatics Unit: ===
  
 
* Assembly and annotation of genomics and transcriptomics data
 
* Assembly and annotation of genomics and transcriptomics data
* Chip-seq, RNA-seq, metagenomics, small ncRNAseq and clip-seq data analysis
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* ChIP-seq, RNA-seq, metagenomics, small ncRNAseq and CLIP-seq data analysis
 
* Downstream analysis (GO enrichment, pathways analysis etc)
 
* Downstream analysis (GO enrichment, pathways analysis etc)
 
* Installation of genome browsers
 
* Installation of genome browsers
* Giving training for biologists and bioinformaticians
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* Training of biologists and bioinformaticians
 
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Luca Cozzuto may be contacted by email at mailto:luca.cozzuto@crg.es
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}}
 
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Revision as of 10:39, 25 August 2016

Luca Cozzuto

Lcozzuto new.jpg




Dr. Luca Cozzuto obtained the PhD in Molecular Medicine at the European School of Molecular Medicine in 2009 ([1]) after getting the Master degree in Pharmaceutical Biotechnologies at the University of Naples "Federico II" in 2004.

During his PhD he studied the structure of chemically modified DNA quadruplex by using NMR along with molecular dynamics approaches. He was also involved in detection and characterization of bacterial RNA repeats with a common secondary structure. Here he learnt programming, database and website developing and a number of bioinformatics tools for detecting non-coding RNAs, sequence clustering and sequence comparison. He was also involved in assembling and annotations of two bacterial genomes, analysis of ChIP-seq data and bioinformatic support to biological research.

My work at the Bioinformatics Unit:

  • Assembly and annotation of genomics and transcriptomics data
  • ChIP-seq, RNA-seq, metagenomics, small ncRNAseq and CLIP-seq data analysis
  • Downstream analysis (GO enrichment, pathways analysis etc)
  • Installation of genome browsers
  • Training of biologists and bioinformaticians
Bioinformatics Core Facility @ CRG — 2011-2024