Difference between revisions of "Galaxy"

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(CRG local implementation)
 
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= CRG local implementation =
 
= CRG local implementation =
  
We are currently working in the implementation of a local Galaxy instance containing bioinformatics tools developed in-house (Gem, T-Coffee and TrimAl etc) in addition to some of the tools in the Galaxy tool shed. This local Galaxy implementation will run the jobs on a cluster of 72 cores and 48GB per node.
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We are currently working in the implementation of a local Galaxy instance.  
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This local Galaxy implementation will run the jobs on a cluster of 72 cores and 48GB per node.
  
 
[[File:CRG-Galaxy-2.png|900px|snapshot of the CRG-Galaxy welcome page]]
 
[[File:CRG-Galaxy-2.png|900px|snapshot of the CRG-Galaxy welcome page]]
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[[File:HardWare_Schema.png|thumb|Hardware schema of the CRG-Galaxy implementation]]
 
[[File:HardWare_Schema.png|thumb|Hardware schema of the CRG-Galaxy implementation]]
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[[Category:Services]]

Latest revision as of 10:32, 22 January 2014

Galaxy (http://wiki.g2.bx.psu.edu) is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  1. Accessible: Users without programming experience can easily specify parameters and run tools and workflows.
  2. Reproducible: Galaxy captures information so that any user can repeat and understand a complete computational analysis.
  3. Transparent: Users share and publish analyses via the web and create Pages, interactive, web-based documents that describe a complete analysis.

CRG local implementation

We are currently working in the implementation of a local Galaxy instance. This local Galaxy implementation will run the jobs on a cluster of 72 cores and 48GB per node.

snapshot of the CRG-Galaxy welcome page


Hardware schema of the CRG-Galaxy implementation
Bioinformatics Core Facility @ CRG — 2011-2024