Difference between revisions of "Standard Bioinformatics Services Cost"
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'''mRNA-seq / small RNA-seq (microRNA, tRNA)''': Data pre-processing (strand control, ribosome contamination and quality filtering, adapter trimming, | '''mRNA-seq / small RNA-seq (microRNA, tRNA)''': Data pre-processing (strand control, ribosome contamination and quality filtering, adapter trimming, | ||
| − | read pairing, QC), read mapping to a reference genome, differential expression analysis at gene level, profiles for the Genome Browser | + | read pairing, QC), read mapping to a reference genome, differential expression analysis at gene level, profiles for the Genome Browser. |
| − | + | Project of up to 12 samples | |
| − | + | €{{#expr: (35.98*16 + 1.39*12) round 0}}+ (CRG / PRBB) | |
| − | + | €{{#expr: (61.68*16 + 2.38*12) round 0}}+ (NON-PROFIT / GOVERNMENT) | |
| − | + | ||
| − | + | Each additional sample | |
| − | + | €{{#expr: (35.98*0.3 + 1.39*1) round 0}}+ (CRG / PRBB) | |
| + | €{{#expr: (61.68*0.3 + 2.38*1) round 0}}+ (NON-PROFIT / GOVERNMENT) | ||
| + | |||
<br/> | <br/> | ||
| − | '''total RNA-seq (mRNA, lncRNA)''': Data pre-processing (quality filtering, adapter trimming, size distribution, QC), read mapping to a reference genome, differential expression analysis | + | '''total RNA-seq (mRNA, lncRNA)''': Data pre-processing (quality filtering, adapter trimming, size distribution, QC), read mapping to a reference genome, differential expression analysis. |
| − | + | Project of up to 12 samples | |
| − | + | €{{#expr: (35.98*16 + 1.39*12*2) round 0}}+ (CRG / PRBB) | |
| − | + | €{{#expr: (61.68*16 + 2.38*12*2) round 0}}+ (NON-PROFIT / GOVERNMENT) | |
| − | + | ||
| − | + | Each additional sample | |
| − | + | €{{#expr: (35.98*0.5 + 1.3*2) round 0}}+ (CRG / PRBB) | |
| + | €{{#expr: (61.68*0.5 + 2.38*2) round 0}}+ (NON-PROFIT / GOVERNMENT) | ||
| + | |||
<br/> | <br/> | ||
| − | '''ChIP-seq / ATAC-seq''': Data pre-processing, read mapping, peak calling, profiles for the Genome Browser, differential enrichment analysis | + | '''ChIP-seq / ATAC-seq / CUT&RUN''': Data pre-processing, read mapping, peak calling, profiles for the Genome Browser, differential enrichment analysis. |
| − | + | Project of up to 12 samples | |
| − | + | €{{#expr: (35.98*16 + 1.39*12*1.5) round 0}}+ (CRG / PRBB) | |
| − | + | €{{#expr: (61.68*16 + 2.38*12*1.5) round 0}}+ (NON-PROFIT / GOVERNMENT) | |
| − | + | ||
| − | + | Each addition sample | |
| − | + | €{{#expr: (35.98*0.5 + 1.39*1.5) round 0}}+ (CRG / PRBB) | |
| + | €{{#expr: (61.68*0.5 + 2.38*1.5) round 0}}+ (NON-PROFIT / GOVERNMENT) | ||
<br/> | <br/> | ||
| − | '''16S rRNA / ITS sequencing''': Data pre-processing (read quality control, filtering, trimming, assembling), OTU assignment, taxa abundances profiles (alpha- and beta-diversities and statistical analysis | + | '''16S rRNA / ITS sequencing''': Data pre-processing (read quality control, filtering, trimming, assembling), OTU assignment, taxa abundances profiles (alpha- and beta-diversities and statistical analysis are for additional price) |
| − | + | Project of one plate of up to 96 samples | |
| − | + | €{{#expr: (1.39*96 + 35.98*16) round 0}}+ (CRG / PRBB) | |
| − | + | €{{#expr: (2.38*96 + 61.68*16) round 0}}+ (NON-PROFIT / GOVERNMENT) | |
| − | + | ||
| − | + | Each additional plate | |
| − | + | €{{#expr: (35.98*3 + 1.39*96) round 0}}+ (CRG / PRBB) | |
| + | €{{#expr: (61.68*3 + 2.38*96) round 0}}+ (NON-PROFIT / GOVERNMENT) | ||
<br/> | <br/> | ||
Latest revision as of 16:54, 12 January 2024
The prices provided below are for guidance only.
They are estimated based on the CRG officially established cost of the manual work and computing hours. VAT is not included. (+ denotes the minimum price)
mRNA-seq / small RNA-seq (microRNA, tRNA): Data pre-processing (strand control, ribosome contamination and quality filtering, adapter trimming,
read pairing, QC), read mapping to a reference genome, differential expression analysis at gene level, profiles for the Genome Browser.
Project of up to 12 samples €592+ (CRG / PRBB) €1015+ (NON-PROFIT / GOVERNMENT)
Each additional sample €12+ (CRG / PRBB) €21+ (NON-PROFIT / GOVERNMENT)
total RNA-seq (mRNA, lncRNA): Data pre-processing (quality filtering, adapter trimming, size distribution, QC), read mapping to a reference genome, differential expression analysis.
Project of up to 12 samples €609+ (CRG / PRBB) €1044+ (NON-PROFIT / GOVERNMENT)
Each additional sample €21+ (CRG / PRBB) €36+ (NON-PROFIT / GOVERNMENT)
ChIP-seq / ATAC-seq / CUT&RUN: Data pre-processing, read mapping, peak calling, profiles for the Genome Browser, differential enrichment analysis.
Project of up to 12 samples €601+ (CRG / PRBB) €1030+ (NON-PROFIT / GOVERNMENT)
Each addition sample €20+ (CRG / PRBB) €34+ (NON-PROFIT / GOVERNMENT)
16S rRNA / ITS sequencing: Data pre-processing (read quality control, filtering, trimming, assembling), OTU assignment, taxa abundances profiles (alpha- and beta-diversities and statistical analysis are for additional price)
Project of one plate of up to 96 samples €709+ (CRG / PRBB) €1215+ (NON-PROFIT / GOVERNMENT)
Each additional plate €241+ (CRG / PRBB) €414+ (NON-PROFIT / GOVERNMENT)
